If you're using the ZC transmission, you can use 90-93 Integra axles after pulling the dust shields from inside the hubs. You would still have to use the ZC intermediate shaft.
If you want to use your stock axles with the ZC transmission, you'll have to replace the outer cups on the differential. It's not easy, but you can do it to run the DOHC ZC transmission with your stock D series axles.